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Sequence Screening

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dc.contributor.author Jones, Robert
dc.date.accessioned 2007-12-04T17:32:25Z
dc.date.available 2007-12-04T17:32:25Z
dc.date.issued 2007-12-04T17:32:25Z
dc.identifier.uri http://hdl.handle.net/1721.1/39656
dc.description Technical Report in support of the Sloan Foundation study on DNA synthesis and governance options. en
dc.description.abstract Currently the vast majority of DNA synthesis is performed by service companies or by in-house central facilities in universities and large companies. The DNA synthesis industry provides researchers with custom DNA at such low cost and with such convenience that almost all synthesis work takes place in a relatively small number of facilities. A request for DNA synthesis requires that the customer provide the sequence of the molecule. This creates the opportunity to monitor or screen input sequences for matches to a database of pathogen sequences. Finding a positive match at the time the order was received would allow the vendor to alert the relevant authority and to delay shipment of that DNA. I have written a software package, called BlackWatch, that implements sequence screening. This paper will describe the operation of this system, its current shortcomings and ways that these might be addressed. en
dc.description.provenance Submitted by Drew Endy (endy@mit.edu) on 2007-12-04T17:15:23Z No. of bitstreams: 1 Jones Sequence Screening.pdf: 213547 bytes, checksum: 43ac5bc412fe18bcbaca59bc5f2071c1 (MD5) en
dc.description.provenance Approved for entry into archive by Drew Endy(endy@mit.edu) on 2007-12-04T17:32:25Z (GMT) No. of bitstreams: 1 Jones Sequence Screening.pdf: 213547 bytes, checksum: 43ac5bc412fe18bcbaca59bc5f2071c1 (MD5) en
dc.description.provenance Made available in DSpace on 2007-12-04T17:32:25Z (GMT). No. of bitstreams: 1 Jones Sequence Screening.pdf: 213547 bytes, checksum: 43ac5bc412fe18bcbaca59bc5f2071c1 (MD5) en
dc.language.iso en_US en
dc.title Sequence Screening en
dc.type Technical Report en

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