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Browsing MIT Open Access Articles by Title

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  • Agrawal, Neeraj J.; Helk, Bernhard; Trout, Bernhardt L. (Elsevier, 2013-11)
    Identifying hot-spot residues – residues that are critical to protein–protein binding – can help to elucidate a protein's function and assist in designing therapeutic molecules to target those residues. We present a novel ...
  • Hasanhodzic, Jasmina; Lo, Andrew W.; Viola, Emanuele (Taylor & Francis, 2011-06)
    We study market efficiency from a computational viewpoint. Borrowing from theoretical computer science, we define a market to be efficient with respect to resources S (e.g., time, memory) if no strategy using resources S ...
  • Rutishauser, Ueli; Douglas, Rodney J.; Slotine, Jean-Jacques E. (Public Library of Science, 2015-01)
    Previous explanations of computations performed by recurrent networks have focused on symmetrically connected saturating neurons and their convergence toward attractors. Here we analyze the behavior of asymmetrical connected ...
  • Reid, M. T. Homer; White, Jacob K.; Johnson, Steven G. (American Physical Society, 2011-07)
    We extend a recently introduced method for computing Casimir forces between arbitrarily shaped metallic objects [ M. T. H. Reid et al. Phys. Rev. Lett. 103 040401 (2009)] to allow treatment of objects with arbitrary material ...
  • Rausch, Sebastian; Rutherford, Thomas Fox (Springer Netherlands, 2010-06)
    This paper develops a decomposition algorithm by which a market economy with many households may be solved through the computation of equilibria for a sequence of representative agent economies. The paper examines local ...
  • Green, William H.; Sharma, Sandeep (American Chemical Society, 2009-07)
    Using quantum chemical methods, we have explored the region of the C[subscript 6]H[subscript 8] potential energy surface that is relevant in predicting the rate coefficients of various wells and major product channels ...
  • Amarasinghe, Saman P.; Amin, Nada; Thies, William (Institute of Electrical and Electronics Engineers, 2009-01)
    Microfluidic chips are emerging as a powerful platform for automating biology experiments. As it becomes possible to integrate tens of thousands of components on a single chip, researchers will require design automation ...
  • Curran, Timothy G.; Bryson, Bryan D.; Reigelhaupt, Michael; Johnson, Hannah; White, Forest M. (Elsevier, 2013-03)
    Advances in mass spectrometry-based proteomic technologies have increased the speed of analysis and the depth provided by a single analysis. Computational tools to evaluate the accuracy of peptide identifications from these ...
  • Neugebauer, Timothy C.; Perreault, David J. (Institute of Electrical and Electronics Engineers (IEEE), 2003-05)
    This paper investigates computer-aided optimization of DC/DC converters, with a focus on converters for dual-voltage automotive electrical systems. A new CAD optimization approach based on Monte Carlo search methods is ...
  • Page, Damon T.; Kuti, Orsolya J. (Frontiers Research Foundation, 2009-11)
    Altered sociability is a core feature of a variety of human neurological disorders, including autism. Social behaviors may be tested in animal models, such as mice, to study the biological basis of sociability and how this ...
  • Levy, Frank (American Roentgen Ray Society, 2009-05)
    I want to thank Steven Seltzer and the Brigham radiology community for the opportunity to speak today. The invitation is both an honor and a responsibility. It is an honor to follow the distinguished group of previous ...
  • Chiu, Kevin Geeyoung; Raskar, Ramesh (Institute of Electrical and Electronics Engineers, 2009-08)
    We demonstrate a concept of computer vision as a secure, live service on the Internet. We show a platform to distribute a real time vision algorithm using simple widely available Web technologies, such as Adobe Flash. We ...
  • Holroyd, Michael; Baran, Ilya; Lawrence, Jason; Matusik, Wojciech (Association for Computing Machinery (ACM), 2011-12)
    We present a method for automatically converting a digital 3D model into a multilayer model: a parallel stack of high-resolution 2D images embedded within a semi-transparent medium. Multilayer models can be produced quickly ...
  • Kim, Anthony; Medard, Muriel (Institute of Electrical and Electronics Engineers (IEEE), 2011-10)
    We define a notion of network capacity region of networks that generalizes the notion of network capacity defined by Cannons et al. and prove its notable properties such as closedness, boundedness and convexity when the ...
  • Wilson, Matthew A.; Brown, Emery N.; Sarma, Sridevi V.; Nguyen, David P.; Czanner, Gabriela; Wirth, Sylvia; Suzuki, Wendy (MIT Press, 2011-09)
    Characterizing neural spiking activity as a function of intrinsic and extrinsic factors is important in neuroscience. Point process models are valuable for capturing such information; however, the process of fully applying ...
  • Hinds, Oliver; Ghosh, Satrajit; Thompson, Todd W.; Yoo, Julie J.; Triantafyllou, Christina; Gabrieli, Susan; Gabrieli, John D. E. (Elsevier, 2010-08)
    Estimating moment-to-moment changes in blood oxygenation level dependent (BOLD) activation levels from functional magnetic resonance imaging (fMRI) data has applications for learned regulation of regional activation, brain ...
  • Aloupis, Greg; Bose, Prosenjit; Demaine, Erik D.; Langerman, Stefan; Meijer, Henk; Overmars, Mark; Toussaint, Godfried T. (World Scientific, 2011)
    Given a planar polygon (or chain) with a list of edges {e[subscript 1], e[subscript 2], e[subscript 3], …, e[subscript n-1], e[subscript n]}, we examine the effect of several operations that permute this edge list, resulting ...
  • Gummadi, Ramakrishna; Jung, Kyomin; Shah, Devavrat; Sreenivas, Ramavarapu (Institute of Electrical and Electronics Engineers, 2009-04)
    We consider a wireless network of n nodes that communicate over a common wireless medium under some interference constraints. Our work is motivated by the need for an efficient and distributed algorithm to determine the ...
  • Crandall, Jacob W.; Della Penna, Mauro; de Jong, Paul M. A.; Cummings, M. L. (Institute of Electrical and Electronics Engineers (IEEE), 2011-05)
    In time-critical systems in which a human operator supervises multiple semiautomated tasks, failure of the operator to focus attention on high-priority tasks in a timely manner can lower the effectiveness of the system and ...
  • Adams, Allan; Lapan, Joshua M. (Springer Berlin / Heidelberg, 2011-03)
    We compute the massless spectra of a set of flux vacua of the heterotic string. The vacua we study include well-known non-Kähler T [superscript 2]-fibrations over K3 with SU(3) structure and intrinsic torsion. Following ...
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