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Browsing MIT Open Access Articles by Title

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  • Church, Matthew J.; Wai, Brenner; Karl, David M.; DeLong, Edward (John Wiley & Sons, Inc., 2010-03)
    Planktonic Crenarchaea are thought to play a key role in chemolithotrophic ammonia oxidation, a critical step of the marine nitrogen (N) cycle. In this study, we examined the spatial distributions of ammonia-oxidizing ...
  • Apyan, Aram; Barbieri, Richard Alexander; Busza, Wit; Cali, Ivan Amos; Chan, Matthew Hans; Di Matteo, Leonardo; Gomez-Ceballos, Guillelmo; Goncharov, Maxim; Gulhan, Doga Can; Klute, Markus; Lai, Yue Shi; Levin, Andrew Michael; Luckey Jr, P David; Paus, Christoph M. E.; Ralph, Duncan Kelley; Roland, Christof E; Roland, Gunther M; Stephans, George S. F.; Sumorok, Konstanty C; Velicanu, Dragos Alexandru; Veverka, Jan; Wyslouch, Boleslaw; Yang, Mingming; Zanetti, Marco; Wyslouch, Victoria; Lee, Y.-J. (Springer-Verlag, 2015-06)
    This paper presents distributions of topological observables in inclusive three- and four-jet events produced in pp collisions at a centre-of-mass energy of 7TeV with a data sample collected by the CMS experiment corresponding ...
  • Liu, Fu; Stanley, Richard P (Springer US, 2014-10)
    Let T be a collection of 3-element subsets S of {1,…,n} with the property that if i<j<k and a<b<c are two 3-element subsets in S, then there exists an integer sequence x[subscript 1]<x[subscript 2]<⋯<x[subscript n] such ...
  • Gentine, Pierre; Entekhabi, Dara; Polcher, Jan (American Meteorological Society, 2011-12)
    The components of the land surface energy balance respond to periodic incoming radiation forcing with different amplitude and phase characteristics. Evaporative fraction (EF), the ratio of latent heat to available energy ...
  • Panday, Arnico K.; Prinn, Ronald G.; Schär, Christoph (American Geophysical Union, 2009-11)
    After completing a 9-month field experiment studying air pollution and meteorology in the Kathmandu Valley, Nepal, we set up the mesoscale meteorological model MM5 to simulate the Kathmandu Valley's meteorology with a ...
  • Panday, Arnico K.; Prinn, Ronald G. (American Geophysical Union, 2009-05)
    During the dry season of 2004–2005 we carried out field measurements of air pollution and meteorology in the Kathmandu Valley, Nepal, a bowl-shaped urban basin in the Himalayan foothills of Nepal. We measured the trace ...
  • Doherty, P.; Ariyibi, E. A.; Joshua, E. O.; Coster, Anthea J. (Springer-Verlag, 2013-02)
    Ile-Ife lies on the equatorial anomaly region where the ionospheric current is greatly influenced by the existence of the equatorial electrojet. The dual frequency SCINDA NovAtel GSV 4004B GPS receiver recently installed ...
  • Liu, Chuntao; Williams, Earle R.; Zipser, Edward J.; Burns, Gary (American Meteorological Society, 2010-02)
    The long-standing mainstay of support for C. T. R. Wilson’s global circuit hypothesis is the similarity between the diurnal variation of thunderstorm days in universal time and the Carnegie curve of electrical potential ...
  • Lin, Binhua; Cui, Bianxiao; Xu, Xinliang; Zangi, Ronen; Diamant, Haim; Rice, Stuart A. (American Physical Society, 2014-02)
    We report the results of experimental studies of the short-time–long-wavelength behavior of collective particle displacements in quasi-one-dimensional (q1D) and quasi-two-dimensional (q2D) colloid suspensions. Our results ...
  • Kong, Sek; Sahin, Mustafa; Krueger, Dilja; Collins, Christin D.; Wertz, Mary H.; Campbell, Malcolm G.; Leech, Jarrett D.; Bear, Mark; Kunkel, Louis M.; Kohane, Isaac S. (Biomed Central Ltd., 2014-02)
    Background Fragile X syndrome and tuberous sclerosis are genetic syndromes that both have a high rate of comorbidity with autism spectrum disorder (ASD). Several lines of evidence suggest that these two monogenic disorders ...
  • Ryan, Katherine S.; Drennan, Catherine L. (Elsevier, 2009-04)
    Two molecules of the amino acid L-tryptophan are the biosynthetic precursors to a class of natural products named the “bisindoles.” Hundreds of these bisindole molecules have been isolated from natural sources, and many ...
  • Almada, Albert Ernesto; Lin, Charles; Sharp, Phillip A.; Young, Richard A.; Sigova, Alla A.; Mullen, Alan C.; Molinie, Benoit; Gupta, Sumeet; Orlando, David A.; Guenther, Matthew G.; Giallourakis, Cosmas C. (National Academy of Sciences (U.S.), 2013-02)
    Many long noncoding RNA (lncRNA) species have been identified in mammalian cells, but the genomic origin and regulation of these molecules in individual cell types is poorly understood. We have generated catalogs of lncRNA ...
  • Sabatini, David M.; Grabiner, Brian C.; Nardi, Valentina; Birsoy, Kivanc; Possemato, Richard; Shen, Kuang; Sinha, Sumi; Jordan, Alexander; Beck, Andrew H. (American Association for Cancer Research, 2014-03)
    Genes encoding components of the PI3K–AKT–mTOR signaling axis are frequently mutated in cancer, but few mutations have been characterized in MTOR, the gene encoding the mTOR kinase. Using publicly available tumor genome ...
  • Pang, Yan Ling Joy; Abo, Ryan; Levine, Stuart S.; Dedon, Peter C. (Oxford University Press, 2014-10)
    Emerging evidence points to roles for tRNA modifications and tRNA abundance in cellular stress responses. While isolated instances of stress-induced tRNA degradation have been reported, we sought to assess the effects of ...
  • Swager, Timothy Manning; Wang, Fei (American Chemical Society (ACS), 2011-03)
    A diverse array of multiwalled carbon nanotube (MWCNT) sensory materials have been synthesized and used to create sensors capable of identifying volatile organic compounds (VOCs) on the basis of their functional groups. ...
  • Odendall, Charlotte; Dixit, Evelyn; Stavru, Fabrizia; Bierne, Helene; Franz, Kate M; Durbin, Ann Fiegen; Boulant, Steeve; Gehrke, Lee; Cossart, Pascale; Kagan, Jonathan C (Nature Publishing Group, 2014-08)
    Type I interferon responses are considered the primary means by which viral infections are controlled in mammals. Despite this view, several pathogens activate antiviral responses in the absence of type I interferons. The ...
  • Abbar, Sofiane; Amer-Yahia, Sihem; Indyk, Piotr; Mahabadi, Sepideh; Varadarajan, Kasturi R. (Association for Computing Machinery (ACM), 2013-06)
    Motivated by the recent research on diversity-aware search, we investigate the k-diverse near neighbor reporting problem. The problem is defined as follows: given a query point q, report the maximum diversity set S of k ...
  • Slattery, Matthew; Ma, Lijia; Spokony, Rebecca F.; Arthur, Robert K.; Kheradpour, Pouya; Kundaje, Anshul; Negre, Nicolas; Crofts, Alex; Ptashkin, Ryan; Zieba, Jennifer; Ostapenko, Alexander; Suchy, Sarah; Victorsen, Alec; Jameel, Nader; Grundstad, A. Jason; Gao, Wenxuan; Moran, Jennifer R.; Rehm, E. Jay; Grossman, Robert L.; Kellis, Manolis; White, Kevin P. (Nature Publishing Group, 2014-07)
    Annotation of regulatory elements and identification of the transcription-related factors (TRFs) targeting these elements are key steps in understanding how cells interpret their genetic blueprint and their environment ...
  • Modiano, Eytan H.; Lee, Hyang-Won (Institute of Electrical and Electronics Engineers, 2009-06)
    We develop diverse routing schemes for dealing with multiple, possibly correlated, failures. While disjoint path protection can effectively deal with isolated single link failures, recovering from multiple failures is not ...
  • Kong, Liangliang; Jing, Hongmei; Kataoka, Takafumi; Buchwald, Carolyn; Liu, Hongbin (Public Library of Science, 2013-10)
    Anaerobic ammonia oxidation (anammox) as an important nitrogen loss pathway has been reported in marine oxygen minimum zones (OMZs), but the community composition and spatial distribution of anammox bacteria in the eastern ...
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