OREMP: Ontology Reasoning Engine for Molecular Pathways
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paper-06.pdf
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143.85 KB
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Adobe PDF
Checksum (MD5)
2071430642ef208571b8c38c652eada9
Author(s)
Umeton, Renato
Yankama, Beracah
Nicosia, Giuseppe
Dewey, C. Forbes
Date Issued
May 2010
Journal
Proceedings of the 1st Workshop on Ontology Repositories and Editors for the Semantic Web
Citation
Umeton, Renato, Beracah Yankama, Giuseppe Nicosia, and C. Forbes Dewey, Jr. "OREMP: Ontology Reasoning Engine for Molecular Pathways." 1st Workshop on Ontology Repositories and Editors for the Semantic Web (May 2010).
Version
Final published version
Abstract
The information about molecular processes is shared continuously in the form of runnable pathway collections, and biomedical ontologies provide a semantic context to the majority of those pathways. Recent advances in both fields pave the way for a scalable information integration based on aggregate knowledge repositories, but the lack of overall standard formats impedes this progress. Here we propose a strategy that integrates these resources by means of extended ontologies built on top of a common meta-format. Information sharing, integration and discovery are the primary features provided by the system; additionally, two current field applications of the system are reported.
MIT Department
Massachusetts Institute of Technology. Department of Biological Engineering
Massachusetts Institute of Technology. Department of Mechanical Engineering
Terms of Use
Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use.
Persistent DSpace Link
DOI of Published Version
http://ceur-ws.org/Vol-596/paper-06.pdf
