Platform for spatial molecular data
Name
971494098-MIT.pdf
Description
Full printable version
Size
2.4 MB
Format
Adobe PDF
Checksum (MD5)
39a1e07a188cb5ed83bb1c87bc1a12d6
Author(s)
Dasari, Vivek
Advisor(s)
Richard Terry and George Church.
Date Issued
2015
Publisher
Massachusetts Institute of Technology
Abstract
I designed and implemented a comprehensive platform for storing, analyzing, visualizing, and interacting with spatial molecular data. With the advent of high throughput in situ sequencing methods, such as fluorescent in situ sequencing (FISSEQ), the need for a platform to organize spatial molecular data has become paramount. The platform is divided into seven services: raw data handling, a spatial coordinate system, an analysis service, an image service, a molecular data service, a spatial data service and a visualization service. Together, these services compose a modular system for organizing the next generation of spatial molecular data.
Description
Thesis: M. Eng. in Computer Science and Molecular Biology, Massachusetts Institute of Technology, Department of Electrical Engineering and Computer Science, 2015.
Cataloged from PDF version of thesis.
Includes bibliographical references (pages 49-50).
Subjects
Electrical Engineering and Computer Science.
MIT Department
Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science
Terms of Use
MIT theses are protected by copyright. They may be viewed, downloaded, or printed from this source but further reproduction or distribution in any format is prohibited without written permission.
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