Platform for spatial molecular data

Abstract

I designed and implemented a comprehensive platform for storing, analyzing, visualizing, and interacting with spatial molecular data. With the advent of high throughput in situ sequencing methods, such as fluorescent in situ sequencing (FISSEQ), the need for a platform to organize spatial molecular data has become paramount. The platform is divided into seven services: raw data handling, a spatial coordinate system, an analysis service, an image service, a molecular data service, a spatial data service and a visualization service. Together, these services compose a modular system for organizing the next generation of spatial molecular data.