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dc.contributor.advisorPeter W. Reddien.en_US
dc.contributor.authorCloutier, Jennifer K.(Jennifer Kruse)en_US
dc.contributor.otherMassachusetts Institute of Technology. Department of Biology.en_US
dc.date.accessioned2020-09-03T17:48:00Z
dc.date.available2020-09-03T17:48:00Z
dc.date.copyright2020en_US
dc.date.issued2020en_US
dc.identifier.urihttps://hdl.handle.net/1721.1/127124
dc.descriptionThesis: Ph. D., Massachusetts Institute of Technology, Department of Biology, May, 2020en_US
dc.descriptionCataloged from the official PDF of thesis.en_US
dc.descriptionIncludes bibliographical references.en_US
dc.description.abstractA central problem in animal regeneration is how animals determine what body part to regenerate. Planarians are flatworms that can regenerate any missing body part, and are studied to identify mechanisms underlying regeneration. At transverse amputation planes, a poorly understood mechanism specifies regeneration of either a head or a tail. This head-versus-tail regeneration decision-making process is referred to as regeneration polarity and has been studied for over a century to identify mechanisms that specify what to regenerate. The Wnt antagonist gene notum is induced within hours after injury robustly at anterior-facing wounds preferentially, where it specifies head regeneration. We report that Activin signaling is required for regeneration polarity, and the underlying asymmetric activation of notum preferentially at anterior-facing wounds. We propose Activin signaling is involved in regeneration-specific responses broadly in the animal kingdom. Planarian patterning requires signaling from specific subsets of muscle cells. Furthermore, several of these subsets have been shown to express specific transcription factors, for which inhibition results in specific patterning phenotypes. Muscle heterogeneity and function in regeneration can be further studied through optimized single-cell sequencing datasets. We report an improved 10x -based planarian muscle cell scRNA-seq dataset that predicts novel transcription factors associated with muscle cell heterogeneity.en_US
dc.description.statementofresponsibilityby Jennifer K. Cloutier.en_US
dc.format.extent194 pagesen_US
dc.language.isoengen_US
dc.publisherMassachusetts Institute of Technologyen_US
dc.rightsMIT theses may be protected by copyright. Please reuse MIT thesis content according to the MIT Libraries Permissions Policy, which is available through the URL provided.en_US
dc.rights.urihttp://dspace.mit.edu/handle/1721.1/7582en_US
dc.subjectBiology.en_US
dc.titleActivin signaling controls a wound-induced program essential for regenerative patterningen_US
dc.typeThesisen_US
dc.description.degreePh. D.en_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Biologyen_US
dc.identifier.oclc1191837077en_US
dc.description.collectionPh.D. Massachusetts Institute of Technology, Department of Biologyen_US
dspace.imported2020-09-03T17:48:00Zen_US
mit.thesis.degreeDoctoralen_US
mit.thesis.departmentBioen_US


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