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dc.contributor.advisorKlavs F. Jensen and Robert S. Langer.en_US
dc.contributor.authorSharei, Armon R. (Armon Reza)en_US
dc.contributor.otherMassachusetts Institute of Technology. Department of Chemical Engineering.en_US
dc.date.accessioned2013-10-24T17:44:14Z
dc.date.available2013-10-24T17:44:14Z
dc.date.issued2013en_US
dc.identifier.urihttp://hdl.handle.net/1721.1/81688
dc.descriptionThesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Chemical Engineering, 2013.en_US
dc.description"June 2016." Cataloged from PDF version of thesis.en_US
dc.descriptionIncludes bibliographical references (p. 158-165).en_US
dc.description.abstractIntracellular delivery of material is a long-standing challenge for both therapeutic and research applications. Existing technologies rely on a variety of mechanisms to facilitate delivery. Vector-based methods, such as polymeric nanoparticles and liposomes, form complexes with the target material and subsequently facilitate its uptake by the cell of interest, often through endocytosis. Although effective in some applications, these methods have had difficulty translating to patient-derived primary cells, especially stem cells and immune cells. Moreover, these vectors are often limited in the range of target materials they can deliver and leave much material trapped in endocytotic vesicles. Physical methods, such as electroporation and sonoporation, have been able to address some of the challenges with vector-based methods by providing a platform for physical disruption of the cell membrane. By eliminating the need for vector materials and circumventing the endocytotic pathway, these methods have shown an advantage in some applications, especially those involving primary cells that are recalcitrant to vector-based methods. However, both electroporation and sonoporation suffer from high cell toxicity and have had limited success in delivering materials such as proteins and nanomaterials. Electroporation in particular has been shown to damage certain target materials, such as quantum dots. Microinjection, an alternative method in which cells are punctured by a microneedle, can address a variety of target materials and cell types however its low throughput has hindered its adoption for most applications. There is thus a need for more effective intracellular delivery methods. This dissertation describes a microfluidic approach to intracellular delivery that seeks to embody the advantages of a physical method, while mitigating issues related to toxicity and damage to the target material. In our method, the cells of interest are prepared in suspension with the target delivery material and flown through a parallel network of microfluidic channels. Each channel contains a constriction point where the cells are rapidly deformed, or squeezed, as they pass through. This process induces temporary disruption of the cell membrane thereby enabling diffusive transport of material from the surrounding buffer into the cell cytosol. These disruptions persist for less than 5min before membrane integrity is fully restored. This method has thus far been demonstrated in over 15 cell types and has been able to deliver a variety of functional materials including, DNA, RNA, proteins, quantum dots, carbon nanotubes, and small molecules. Our cell squeezing technology has further illustrated its enabling potential in a number of applications detailed herein. Quantum dots are a promising alternative to organic fluorescent dyes due to their superior spectral properties and stability. These nanoparticles have much potential as imaging agents in vitro and in vivo. Delivery of undamaged quantum dots to the cell cytoplasm has been a challenge with existing techniques. Vector-based methods have resulted in aggregation and endosomal sequestration of quantum dots while electroporation can damage the semi-conducting particles and aggregate delivered dots in the cytosol. In our work, we demonstrated efficient cytosolic delivery of quantum dots without inducing aggregation, trapping material in endosomes, or significant loss of cell viability. Moreover, we have shown that individual quantum dots delivered by this approach are detectable in the cell cytosol, thus illustrating the potential of this technique for single molecule tracking studies. These results indicate that our method could potentially be implemented as a robust platform for quantum dot based imaging in a variety of applications. The reprogramming of somatic cells into induced pluripotent stem cells (iPSCs) has much potential in its ability to address existing challenges in regenerative medicine by providing a patient-specific source of pluripotent stem cells to generate new tissue. The mechanism of this reprogramming process, however, is still poorly understood and existing technologies suffer from chronically low reprogramming efficiencies (<4%). Moreover, many existing approaches to reprogramming rely on viral vectors to facilitate the delivery of the target transcription factors - these vectors are considered inappropriate for clinical applications due to safety concerns. Cytosolic delivery of protein transcription factors is a possible alternative to viral and plasmidbased reprogramming techniques. Direct protein delivery would negate the current safety concerns with viral and plasmid-based methods as it could not cause potentially tumorigenic changes in the genome. In our work, we implemented the cell squeezing technology as a method to deliver protein transcription factors to the cytosol of primary human fibroblasts. These studies yielded colonies of pluripotent stem cells that appeared to be fully functional. Moreover, the efficiency of this procedure was 10-100x higher than the current state-of-the-art protein reprogramming methods. The versatility of our delivery technology thus provides a promising platform for further study of the reprogramming process and the development of more efficient, clinically applicable, reprogramming procedures. Finally, the technology described herein has been implemented in cancer vaccine applications. Some recent immunotherapies against cancer have focused on the use of dendritic cells as antigen presenting cells. These cells are capable of presenting cancer antigens to other immune cell subsets and prompting a powerful immune response against the target cell type. A significant challenge for these therapies, however, is that current methods to induce antigen presentation in dendritic cells are often inefficient and can potentially induce a parallel regulatory response that reduces treatment efficacy. In our work, we have implemented the device as a platform for direct cytosolic delivery of the target antigen to dendritic cells. This approach could enable effective presentation of the target antigen while minimizing the development of a regulatory response. Our results indicate that this approach can produce effective antigen presentation in vitro, as measured by CD8 T cell coculture assays. Moreover, we have demonstrated effective antigen presentation in B cells, a more desirable clinical alternative to dendritic cells. These results thus illustrate the potential of this technology to be implemented as an enabling, patient-specific vaccination platform with minimal side-effects. In summary, we have developed a robust, high-throughput approach to intracellular delivery. In the described technique, cytosolic delivery is facilitated by the temporary disruption of the cell membrane in response to rapid mechanical deformation of the cell in a microfluidic channel. This technology seeks to addresses some of the challenges of existing vector-based and physical poration methods, such as endocytosis, translation to primary cells, and cell toxicity. Our results in quantum dot, cell reprogramming, and cancer vaccine applications illustrate the strengths of this system. Although in its infancy, this technology has demonstrated the potential to enable a range of clinical and research applications. In the future, better understanding of the underlying mechanism and improvements to the system could produce substantial gains in performance and allow this technique to be widely adopted by researchers and clinicians.en_US
dc.description.statementofresponsibilityby Armon R. Sharei.en_US
dc.format.extent165 p.en_US
dc.language.isoengen_US
dc.publisherMassachusetts Institute of Technologyen_US
dc.rightsM.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission.en_US
dc.rights.urihttp://dspace.mit.edu/handle/1721.1/7582en_US
dc.subjectChemical Engineering.en_US
dc.titleCell squeezing : a vector-free microfluidic platform for intracellular delivery of macromoleculesen_US
dc.title.alternativeVector-free microfluidic platform for intracellular delivery of macromoleculesen_US
dc.typeThesisen_US
dc.description.degreePh.D.en_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Chemical Engineering
dc.identifier.oclc860804208en_US


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