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dc.contributor.advisorCharles L. Cooney.en_US
dc.contributor.authorGriffiths, Steven Wen_US
dc.contributor.otherMassachusetts Institute of Technology. Dept. of Chemical Engineering.en_US
dc.date.accessioned2005-08-23T20:38:34Z
dc.date.available2005-08-23T20:38:34Z
dc.date.copyright2002en_US
dc.date.issued2002en_US
dc.identifier.urihttp://hdl.handle.net/1721.1/8499
dc.descriptionThesis (Ph.D.)--Massachusetts Institute of Technology, Dept. of Chemical Engineering, 2002.en_US
dc.descriptionIncludes bibliographical references (p. 170-186).en_US
dc.description.abstractOxidation is one of the most prevalent forms of chemical modification, and the sulfur-containing amino acids, methionine and cysteine, are susceptible to modification by a wide array of oxidants. Aberrant oxidation reactions are of particular concern in biotechnology and medicine, where they can lead to protein inactivation or destabilization. Therefore, it is important to understand the factors that influence a protein's reactivity toward oxidants from both a bioprocessing and a biomedical perspective. This work characterizes oxidation of methionine and cysteine in recombinant human xcl-antitrypsin, a metastable protein that is a member of the serpin family of plasma protease inhibitors. Analytical techniques were developed to identify and quantify oxidation of each of al-antitrypsin's ten methionine residues, as well as its unpaired thiol, Cys232. It was found that the protein is not susceptible to oxidation during production in the E.coli cytoplasm, but does contain highly-reactive methionine and cysteine residues that are of considerable importance within the context of in vitro oxidation. At neutral pH, five methionines, Metl, Met226, Met242, Met351, and Met358, are reactive with hydrogen peroxide. With the exception of Metl, each of these residues is located in or near the protein's active site loop. Methionine oxidation studies revealed that the reactivity of these residues is dependent on environmental conditions, such as pH, that readily perturb the protein's metastable structure.en_US
dc.description.abstract(cont.) Cys232 oxidation studies showed that oxidation of [alpha]l-antitrypsin's unpaired thiol does not lead to the formation of disulfide-linked aggregates, but rather sulfenic, sulfinic, and cysteic acids in successive steps. These species are rapidly formed in vitro as a consequence of Cys232's unusually low pKa of 6.86. Modulation of Cys232's ionization and reactivity could not be accomplished via low pH, however, due to acid-induced structural changes that enhance reactivity. In sum, analytical techniques were developed to study methionine and cysteine oxidation in [alpha]1-antitrypsin and it was found that elements of protein structure that have evolved for the physiological functioning of plasma protease inhibitors dictate oxidation susceptibility during bioprocessing and long-term storage. In the case of oxl-antitrypsin, and perhaps other proteins with similar structural biochemistries, unpaired-thiol oxidation, and not methionine oxidation, is the major contributor to oxidative degradation in vitro.en_US
dc.description.statementofresponsibilityby Steven Wesley Griffiths.en_US
dc.format.extent190 p.en_US
dc.format.extent18739875 bytes
dc.format.extent18739633 bytes
dc.format.mimetypeapplication/pdf
dc.format.mimetypeapplication/pdf
dc.language.isoengen_US
dc.publisherMassachusetts Institute of Technologyen_US
dc.rightsM.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission.en_US
dc.rights.urihttp://dspace.mit.edu/handle/1721.1/7582
dc.subjectChemical Engineering.en_US
dc.titleOxidation of the sulfur-containing amino acids in recombinant human α1-antitrypsinen_US
dc.typeThesisen_US
dc.description.degreePh.D.en_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Chemical Engineering
dc.identifier.oclc50763285en_US


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