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oai:dspace.mit.edu:1721.1/1473682023-01-20T03:31:17Zcom_1721.1_7582com_1721.1_7581col_1721.1_131023

Guo, Ming Yang, Haiqian Massachusetts Institute of Technology. Department of Mechanical Engineering 2023-01-19T18:48:37Z 2023-01-19T18:48:37Z 2022-09 2022-10-05T13:46:11.939Z https://hdl.handle.net/1721.1/147368 https://orcid.org/0000-0002-1068-5555 Cells cooperate as groups to achieve functions at the tissue level, and specific structural characteristics emerge from the local organization of neighboring cells. Analogous to classical physics where transformations in the local structure give rise to phases and phase transitions, the changes in local structures in multicellular assemblies can be essential for a variety of vital processes including morphogenesis, wound healing, and cancer. In this work, we use the two invariants (volume and shear) of the deformation tensor of Delaunay triangles as a pair of quantities to define the local microstates of multicellular living systems. In chapter 3, we develop configurational fingerprints based on these local structures, and extract two parameters, namely the volumetric and shear order parameters, that are reflective of the transitions of local order in the systems. Theoretically, these two parameters form a complete and unique pair of signatures for the local structural order of a multicellular system. The evolution of these two order parameters offers a robust and experimentally accessible way to map the phase transitions in expanding cell monolayers, and during embryogenesis and invasion of epithelial spheroids. In chapter 4, We show by both simulations and experiments that volume follows a k-Gamma distribution, and shear follows an exponential distribution. We further propose two temperature-like quantities for cell assemblies, in which sense we show the periphery of an extravasating epithelial monolayer is ‘hotter’ than the core. S.M. Massachusetts Institute of Technology In Copyright - Educational Use Permitted Copyright MIT http://rightsstatements.org/page/InC-EDU/1.0/ Spatial Organization of Multicellular Living Systems Thesis application/pdf Master Master of Science in Mechanical Engineering Publication unknown unknown <Publication xmlns="https://www.openaire.eu/cerif-profile/1.1/" id="8a56219a-6b98-44c4-b89e-bdf3c78503c4"> <Type xmlns="https://www.openaire.eu/cerif-profile/vocab/COAR_Publication_Types">http://purl.org/coar/resource_type/c_1843</Type> <Title>Spatial Organization of Multicellular Living Systems</Title> <PublishedIn> <Publication> </Publication> </PublishedIn> <PublicationDate>2022-09</PublicationDate> <Authors> <Author> <DisplayName>Yang, Haiqian</DisplayName> <Affiliation> <OrgUnit> </OrgUnit> </Affiliation> </Author> </Authors> <Editors> </Editors> <Publishers> <Publisher> <DisplayName>Massachusetts Institute of Technology</DisplayName> <OrgUnit /> </Publisher> </Publishers> <License>http://rightsstatements.org/page/InC-EDU/1.0/</License> <Abstract>Cells cooperate as groups to achieve functions at the tissue level, and specific structural characteristics emerge from the local organization of neighboring cells. Analogous to classical physics where transformations in the local structure give rise to phases and phase transitions, the changes in local structures in multicellular assemblies can be essential for a variety of vital processes including morphogenesis, wound healing, and cancer. In this work, we use the two invariants (volume and shear) of the deformation tensor of Delaunay triangles as a pair of quantities to define the local microstates of multicellular living systems. In chapter 3, we develop configurational fingerprints based on these local structures, and extract two parameters, namely the volumetric and shear order parameters, that are reflective of the transitions of local order in the systems. Theoretically, these two parameters form a complete and unique pair of signatures for the local structural order of a multicellular system. The evolution of these two order parameters offers a robust and experimentally accessible way to map the phase transitions in expanding cell monolayers, and during embryogenesis and invasion of epithelial spheroids. In chapter 4, We show by both simulations and experiments that volume follows a k-Gamma distribution, and shear follows an exponential distribution. We further propose two temperature-like quantities for cell assemblies, in which sense we show the periphery of an extravasating epithelial monolayer is ‘hotter’ than the core.</Abstract> <Access xmlns="http://purl.org/coar/access_right" > </Access> </Publication>