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dc.contributor.authorMoore, Penny L.
dc.contributor.authorShaffer, James S
dc.contributor.authorKardar, Mehran
dc.contributor.authorChakraborty, Arup K
dc.date.accessioned2017-05-10T19:24:16Z
dc.date.available2017-05-10T19:24:16Z
dc.date.issued2016-10
dc.date.submitted2016-07
dc.identifier.issn0027-8424
dc.identifier.issn1091-6490
dc.identifier.urihttp://hdl.handle.net/1721.1/108795
dc.description.abstractStrategies to elicit Abs that can neutralize diverse strains of a highly mutable pathogen are likely to result in a potent vaccine. Broadly neutralizing Abs (bnAbs) against HIV have been isolated from patients, proving that the human immune system can evolve them. Using computer simulations and theory, we study immunization with diverse mixtures of variant antigens (Ags). Our results show that particular choices for the number of variant Ags and the mutational distances separating them maximize the probability of inducing bnAbs. The variant Ags represent potentially conflicting selection forces that can frustrate the Darwinian evolutionary process of affinity maturation. An intermediate level of frustration maximizes the chance of evolving bnAbs. A simple model makes vivid the origin of this principle of optimal frustration. Our results, combined with past studies, suggest that an appropriately chosen permutation of immunization with an optimally designed mixture (using the principles that we describe) and sequential immunization with variant Ags that are separated by relatively large mutational distances may best promote the evolution of bnAbs.en_US
dc.language.isoen_US
dc.publisherNational Academy of Sciences (U.S.)en_US
dc.relation.isversionofhttp://dx.doi.org/10.1073/pnas.1614940113en_US
dc.rightsArticle is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use.en_US
dc.sourcePNASen_US
dc.titleOptimal immunization cocktails can promote induction of broadly neutralizing Abs against highly mutable pathogensen_US
dc.typeArticleen_US
dc.identifier.citationShaffer, J. Scott; Moore, Penny L.; Kardar, Mehran and Chakraborty, Arup K. “Optimal Immunization Cocktails Can Promote Induction of Broadly Neutralizing Abs Against Highly Mutable Pathogens.” Proceedings of the National Academy of Sciences 113, no. 45 (October 2016): E7039–E7048. © National Academy of Sciencesen_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Biological Engineeringen_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Mechanical Engineeringen_US
dc.contributor.departmentMassachusetts Institute of Technology. Department of Physicsen_US
dc.contributor.mitauthorShaffer, James S
dc.contributor.mitauthorKardar, Mehran
dc.contributor.mitauthorChakraborty, Arup K
dc.relation.journalProceedings of the National Academy of Sciencesen_US
dc.eprint.versionFinal published versionen_US
dc.type.urihttp://purl.org/eprint/type/JournalArticleen_US
eprint.statushttp://purl.org/eprint/status/PeerRevieweden_US
dspace.orderedauthorsShaffer, J. Scott; Moore, Penny L.; Kardar, Mehran; Chakraborty, Arup K.en_US
dspace.embargo.termsNen_US
dc.identifier.orcidhttps://orcid.org/0000-0002-1124-6124
dc.identifier.orcidhttps://orcid.org/0000-0002-1112-5912
dc.identifier.orcidhttps://orcid.org/0000-0003-1268-9602
mit.licensePUBLISHER_POLICYen_US


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