Show simple item record

dc.contributor.authorMagnain, Caroline
dc.contributor.authorAugustinack, Jean C.
dc.contributor.authorTirrell, Lee
dc.contributor.authorFogarty, Morgan
dc.contributor.authorFrosch, Matthew P.
dc.contributor.authorBoas, David A
dc.contributor.authorFischl, Bruce
dc.contributor.authorRockland, Kathleen S.
dc.date.accessioned2020-12-22T21:52:58Z
dc.date.available2020-12-22T21:52:58Z
dc.date.issued2018-10
dc.date.submitted2017-11
dc.identifier.issn1863-2653
dc.identifier.issn1863-2661
dc.identifier.urihttps://hdl.handle.net/1721.1/128905
dc.description.abstractOptical coherence tomography is an optical technique that uses backscattered light to highlight intrinsic structure, and when applied to brain tissue, it can resolve cortical layers and fiber bundles. Optical coherence microscopy (OCM) is higher resolution (i.e., 1.25 µm) and is capable of detecting neurons. In a previous report, we compared the correspondence of OCM acquired imaging of neurons with traditional Nissl stained histology in entorhinal cortex layer II. In the current method-oriented study, we aimed to determine the colocalization success rate between OCM and Nissl in other brain cortical areas with different laminar arrangements and cell packing density. We focused on two additional cortical areas: medial prefrontal, pre-genual Brodmann area (BA) 32 and lateral temporal BA 21. We present the data as colocalization matrices and as quantitative percentages. The overall average colocalization in OCM compared to Nissl was 67% for BA 32 (47% for Nissl colocalization) and 60% for BA 21 (52% for Nissl colocalization), but with a large variability across cases and layers. One source of variability and confounds could be ascribed to an obscuring effect from large and dense intracortical fiber bundles. Other technical challenges, including obstacles inherent to human brain tissue, are discussed. Despite limitations, OCM is a promising semi-high throughput tool for demonstrating detail at the neuronal level, and, with further development, has distinct potential for the automatic acquisition of large databases as are required for the human brain.en_US
dc.description.sponsorshipNational Institute of Mental Health (Grant MH107456)en_US
dc.description.sponsorshipNational Institute for Biomedical Imaging and Bioengineering (Grant P41EB015896, 1R01EB023281, R01EB006758, R21EB018907, R01EB019956)en_US
dc.description.sponsorshipNational Institute on Aging (Grant 5R01AG008122, R01AG016495)en_US
dc.description.sponsorshipNational Institute of Diabetes and Digestive and Kidney Diseases (Grant 1-R21-DK-108277-01)en_US
dc.description.sponsorshipNational Institute for Neurological Disorders and Stroke (Grant R01NS0525851, R21NS072652, R01NS070963, R01NS083534, 5U01NS086625)en_US
dc.description.sponsorshipNIH Blueprint for Neuroscience Research (Grant 5U01-MH093765)en_US
dc.description.sponsorshipNIH Shared Instrumentation (Grants 1S10RR023401, 1S10RR019307, 1S10RR023043)en_US
dc.publisherSpringer Science and Business Media LLCen_US
dc.relation.isversionofhttps://doi.org/10.1007/s00429-018-1777-zen_US
dc.rightsArticle is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use.en_US
dc.sourceSpringer Berlin Heidelbergen_US
dc.titleColocalization of neurons in optical coherence microscopy and Nissl-stained histology in Brodmann’s area 32 and area 21en_US
dc.typeArticleen_US
dc.identifier.citationMagnain, C. et al. "Colocalization of neurons in optical coherence microscopy and Nissl-stained histology in Brodmann’s area 32 and area 21." Brain Structure and Function 224, 1 (October 2018): 351–362 © 2018 Springer-Verlag GmbH Germany, part of Springer Natureen_US
dc.contributor.departmentMIT-IBM Watson AI Laben_US
dc.contributor.departmentMassachusetts Institute of Technology. Institute for Medical Engineering & Scienceen_US
dc.contributor.departmentHarvard University--MIT Division of Health Sciences and Technologyen_US
dc.relation.journalBrain Structure and Functionen_US
dc.eprint.versionAuthor's final manuscripten_US
dc.type.urihttp://purl.org/eprint/type/JournalArticleen_US
eprint.statushttp://purl.org/eprint/status/PeerRevieweden_US
dc.date.updated2020-09-24T20:57:33Z
dc.language.rfc3066en
dc.rights.holderSpringer-Verlag GmbH Germany, part of Springer Nature
dspace.embargo.termsY
dspace.date.submission2020-09-24T20:57:33Z
mit.journal.volume224en_US
mit.journal.issue1en_US
mit.licensePUBLISHER_POLICY
mit.metadata.statusComplete


Files in this item

Thumbnail

This item appears in the following Collection(s)

Show simple item record