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dc.contributor.authorSchwalbe-Koda, Daniel
dc.contributor.authorTan, Aik Rui
dc.contributor.authorGómez-Bombarelli, Rafael
dc.date.accessioned2022-05-13T15:22:17Z
dc.date.available2022-05-13T15:22:17Z
dc.date.issued2021
dc.identifier.urihttps://hdl.handle.net/1721.1/142526
dc.description.abstract<jats:title>Abstract</jats:title><jats:p>Neural network (NN) interatomic potentials provide fast prediction of potential energy surfaces, closely matching the accuracy of the electronic structure methods used to produce the training data. However, NN predictions are only reliable within well-learned training domains, and show volatile behavior when extrapolating. Uncertainty quantification methods can flag atomic configurations for which prediction confidence is low, but arriving at such uncertain regions requires expensive sampling of the NN phase space, often using atomistic simulations. Here, we exploit automatic differentiation to drive atomistic systems towards high-likelihood, high-uncertainty configurations without the need for molecular dynamics simulations. By performing adversarial attacks on an uncertainty metric, informative geometries that expand the training domain of NNs are sampled. When combined with an active learning loop, this approach bootstraps and improves NN potentials while decreasing the number of calls to the ground truth method. This efficiency is demonstrated on sampling of kinetic barriers, collective variables in molecules, and supramolecular chemistry in zeolite-molecule interactions, and can be extended to any NN potential architecture and materials system.</jats:p>en_US
dc.language.isoen
dc.publisherSpringer Science and Business Media LLCen_US
dc.relation.isversionof10.1038/S41467-021-25342-8en_US
dc.rightsCreative Commons Attribution 4.0 International Licenseen_US
dc.rights.urihttps://creativecommons.org/licenses/by/4.0en_US
dc.sourceNatureen_US
dc.titleDifferentiable sampling of molecular geometries with uncertainty-based adversarial attacksen_US
dc.typeArticleen_US
dc.identifier.citationSchwalbe-Koda, Daniel, Tan, Aik Rui and Gómez-Bombarelli, Rafael. 2021. "Differentiable sampling of molecular geometries with uncertainty-based adversarial attacks." Nature Communications, 12 (1).
dc.contributor.departmentMassachusetts Institute of Technology. Department of Materials Science and Engineering
dc.relation.journalNature Communicationsen_US
dc.eprint.versionFinal published versionen_US
dc.type.urihttp://purl.org/eprint/type/JournalArticleen_US
eprint.statushttp://purl.org/eprint/status/PeerRevieweden_US
dc.date.updated2022-05-13T15:17:01Z
dspace.orderedauthorsSchwalbe-Koda, D; Tan, AR; Gómez-Bombarelli, Ren_US
dspace.date.submission2022-05-13T15:17:04Z
mit.journal.volume12en_US
mit.journal.issue1en_US
mit.licensePUBLISHER_CC
mit.metadata.statusAuthority Work and Publication Information Neededen_US


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