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Automated detection and reacquisition of motion‐degraded images in fetal HASTE imaging at 3 T

Author(s)
Gagoski, Borjan; Xu, Junshen; Wighton, Paul; Tisdall, M Dylan; Frost, Robert; Lo, Wei-Ching; Golland, Polina; Kouwe, Andre; Adalsteinsson, Elfar; Grant, P Ellen; ... Show more Show less
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Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International https://creativecommons.org/licenses/by-nc-sa/4.0/
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Abstract
PURPOSE: Fetal brain Magnetic Resonance Imaging suffers from unpredictable and unconstrained fetal motion that causes severe image artifacts even with half-Fourier single-shot fast spin echo (HASTE) readouts. This work presents the implementation of a closed-loop pipeline that automatically detects and reacquires HASTE images that were degraded by fetal motion without any human interaction. METHODS: A convolutional neural network that performs automatic image quality assessment (IQA) was run on an external GPU-equipped computer that was connected to the internal network of the MRI scanner. The modified HASTE pulse sequence sent each image to the external computer, where the IQA convolutional neural network evaluated it, and then the IQA score was sent back to the sequence. At the end of the HASTE stack, the IQA scores from all the slices were sorted, and only slices with the lowest scores (corresponding to the slices with worst image quality) were reacquired. RESULTS: The closed-loop HASTE acquisition framework was tested on 10 pregnant mothers, for a total of 73 acquisitions of our modified HASTE sequence. The IQA convolutional neural network, which was successfully employed by our modified sequence in real time, achieved an accuracy of 85.2% and area under the receiver operator characteristic of 0.899. CONCLUSION: The proposed acquisition/reconstruction pipeline was shown to successfully identify and automatically reacquire only the motion degraded fetal brain HASTE slices in the prescribed stack. This minimizes the overall time spent on HASTE acquisitions by avoiding the need to repeat the entire stack if only few slices in the stack are motion-degraded.
Date issued
2022
URI
https://hdl.handle.net/1721.1/142676
Department
Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science; Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory; Massachusetts Institute of Technology. Institute for Medical Engineering & Science
Journal
Magnetic Resonance in Medicine
Publisher
Wiley
Citation
Gagoski, Borjan, Xu, Junshen, Wighton, Paul, Tisdall, M Dylan, Frost, Robert et al. 2022. "Automated detection and reacquisition of motion‐degraded images in fetal HASTE imaging at 3 T." Magnetic Resonance in Medicine, 87 (4).
Version: Author's final manuscript

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