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Introducing meta-services for biomedical information extraction

dc.contributor.authorLeitner, Florianen_US
dc.contributor.authorKrallinger, Martinen_US
dc.contributor.authorRodriguez-Penagos, Carlosen_US
dc.contributor.authorHakenberg, Jorgen_US
dc.contributor.authorPlake, Conraden_US
dc.contributor.authorKuo, Cheng-Juen_US
dc.contributor.authorHsu, Chun-Nanen_US
dc.contributor.authorTsai, Richard Tzong-Hanen_US
dc.contributor.authorHung, Hsi-Chuanen_US
dc.contributor.authorLau, William W.en_US
dc.contributor.authorJohnson, Calvin A.en_US
dc.contributor.authorSaetre, Runeen_US
dc.contributor.authorYoshida, Kazuhiroen_US
dc.contributor.authorChen, Yan Huaen_US
dc.contributor.authorKim, Sunen_US
dc.contributor.authorShin, Soo-Yongen_US
dc.contributor.authorZhang, Byoung-Taken_US
dc.contributor.authorBaumgartner, William A. Jren_US
dc.contributor.authorHunter, Lawrenceen_US
dc.contributor.authorHaddow, Barryen_US
dc.contributor.authorMatthews, Michaelen_US
dc.contributor.authorWang, Xinglongen_US
dc.contributor.authorRuch, Patricken_US
dc.contributor.authorEhrler, Fredericen_US
dc.contributor.authorOzgur, Arzucanen_US
dc.contributor.authorErkan, Gunesen_US
dc.contributor.authorRadev, Dragomir R.en_US
dc.contributor.authorKrauthammer, Michaelen_US
dc.contributor.authorLuong, ThaiBinhen_US
dc.contributor.authorHoffmann, Roberten_US
dc.contributor.authorSander, Chrisen_US
dc.contributor.authorValencia, Alfonsoen_US
dc.date.accessioned2009-10-19T13:46:44Z
dc.date.available2009-10-19T13:46:44Z
dc.date.issued2008-09en_US
dc.identifier.urihttp://hdl.handle.net/1721.1/49491
dc.description.abstractWe introduce the first meta-service for information extraction in molecular biology, the BioCreative MetaServer (BCMS; http://bcms.bioinfo.cnio.es/). This prototype platform is a joint effort of 13 research groups and provides automatically generated annotations for PubMed/Medline abstracts. Annotation types cover gene names, gene IDs, species, and protein-protein interactions. The annotations are distributed by the meta-server in both human and machine readable formats (HTML/XML). This service is intended to be used by biomedical researchers and database annotators, and in biomedical language processing. The platform allows direct comparison, unified access, and result aggregation of the annotations.en_US
dc.language.isoen_USen_US
dc.publisherBioMed Central Ltd.en_US
dc.relation.isversionofhttp://dx.doi.org/10.1186/gb-2008-9-s2-s6en_US
dc.rightsCreative Commons Attributionen_US
dc.rights.urihttp://creativecommons.org/licenses/by/2.0en_US
dc.sourcePublisheren_US
dc.titleIntroducing meta-services for biomedical information extractionen_US
dc.typeArticleen_US
dc.identifier.citationF. Leitner, M. Krallinger, C. Rodriguez-Penagos, J. Hakenberg, C. Plake, C. Kuo, C. Hsu, R. Tsai, H. Hung, W. Lau, C. Johnson, R. Saetre, K. Yoshida, Y. Chen, S. Kim, S. Shin, B. Zhang, W. Baumgartner, L. Hunter, B. Haddow, M. Matthews, X. Wang, P. Ruch, F. Ehrler, A. Ozgur, G. Erkan, D. Radev, M. Krauthammer, T. Luong, R. Hoffmann, C. Sander, and A. Valencia, “Introducing meta-services for biomedical information extraction,” Genome Biology, vol. 9, 2008, p. S6.en_US
dc.contributor.departmentMassachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratoryen_US
dc.contributor.approverHoffmann, Roberten_US
dc.contributor.mitauthorHoffmann, Roberten_US
dc.relation.journalGenome Biologyen_US
dc.eprint.versionFinal published versionen_US
dc.identifier.pmid18834497en_US
dc.type.urihttp://purl.org/eprint/type/JournalArticleen_US
eprint.statushttp://purl.org/eprint/status/PeerRevieweden_US
dspace.orderedauthorsLeitner, Florian; Krallinger, Martin; Rodriguez-Penagos, Carlos; Hakenberg, Jörg; Plake, Conrad; Kuo, Cheng-Ju; Hsu, Chun-Nan; Tsai, Richard; Hung, Hsi-Chuan; Lau, William W; Johnson, Calvin A; Sætre, Rune; Yoshida, Kazuhiro; Chen, Yan; Kim, Sun; Shin, Soo-Yong; Zhang, Byoung-Tak; Baumgartner, William A; Hunter, Lawrence; Haddow, Barry; Matthews, Michael; Wang, Xinglong; Ruch, Patrick; Ehrler, Frédéric; Özgür, Arzucan; Erkan, Güne; Radev, Dragomir R; Krauthammer, Michael; Luong, ThaiBinh; Hoffmann, Robert; Sander, Chris; Valencia, Alfonsoen
mit.licensePUBLISHER_CCen_US
mit.metadata.statusComplete


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