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dc.contributor.authorMcGee, Sasha
dc.contributor.authorMirkovic, Jelena
dc.contributor.authorMardirossian, Vartan
dc.contributor.authorElackattu, Alphi
dc.contributor.authorYu, Chung-Chieh
dc.contributor.authorKabani, Sadru
dc.contributor.authorGallagher, George
dc.contributor.authorPistey, Robert
dc.contributor.authorGalindo, Luis H.
dc.contributor.authorBadizadegan, Kamran
dc.contributor.authorWang, Zimmern
dc.contributor.authorDasari, Ramachandra Rao
dc.contributor.authorFeld, Michael S.
dc.contributor.authorGrillone, Gregory
dc.date.accessioned2010-03-17T12:51:24Z
dc.date.available2010-03-17T12:51:24Z
dc.date.issued2008-12
dc.date.submitted2008-07
dc.identifier.issn1083-3668
dc.identifier.urihttp://hdl.handle.net/1721.1/52640
dc.description.abstractIn order to evaluate the impact of anatomy on the spectral properties of oral tissue, we used reflectance and fluorescence spectroscopy to characterize nine different anatomic sites. All spectra were collected in vivo from healthy oral mucosa. We analyzed 710 spectra collected from the oral cavity of 79 healthy volunteers. From the spectra, we extracted spectral parameters related to the morphological and biochemical properties of the tissue. The parameter distributions for the nine sites were compared, and we also related the parameters to the physical properties of the tissue site. k-Means cluster analysis was performed to identify sites or groups of sites that showed similar or distinct spectral properties. For the majority of the spectral parameters, certain sites or groups of sites exhibited distinct parameter distributions. Sites that are normally keratinized, most notably the hard palate and gingiva, were distinct from nonkeratinized sites for a number of parameters and frequently clustered together. The considerable degree of spectral contrast (differences in the spectral properties) between anatomic sites was also demonstrated by successfully discriminating between several pairs of sites using only two spectral parameters. We tested whether the 95% confidence interval for the distribution for each parameter, extracted from a subset of the tissue data could correctly characterize a second set of validation data. Excellent classification accuracy was demonstrated. Our results reveal that intrinsic differences in the anatomy of the oral cavity produce significant spectral contrasts between various sites, as reflected in the extracted spectral parameters. This work provides an important foundation for guiding the development of spectroscopic-based diagnostic algorithms for oral cancer.en
dc.description.sponsorshipNational Institutes of Health (Grants No. CA097966-03 and No. P41 RR02594-21)en
dc.language.isoen_US
dc.publisherSociety of Photo-optical Instrumentation Engineersen
dc.relation.isversionofhttp://dx.doi.org/10.1117/1.2992139en
dc.rightsArticle is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use.en
dc.sourceGabriel Holbrowen
dc.subjectspectroscopyen
dc.subjectreflectanceen
dc.subjectfluorescenceen
dc.titleModel-based spectroscopic analysis of the oral cavity: impact of anatomyen
dc.typeArticleen
dc.identifier.citationMcGee, Sasha et al. “Model-based spectroscopic analysis of the oral cavity: impact of anatomy.” Journal of Biomedical Optics 13.6 (2008): 064034-15.en
dc.contributor.departmentMassachusetts Institute of Technology. Department of Physicsen_US
dc.contributor.departmentMassachusetts Institute of Technology. Spectroscopy Laboratoryen_US
dc.contributor.approverFeld, Michael S.
dc.contributor.mitauthorMcGee, Sasha
dc.contributor.mitauthorMirkovic, Jelena
dc.contributor.mitauthorGalindo, Luis H.
dc.contributor.mitauthorDasari, Ramachandra Rao
dc.contributor.mitauthorFeld, Michael S.
dc.relation.journalJournal of Biomedical Opticsen
dc.eprint.versionAuthor's final manuscript
dc.type.urihttp://purl.org/eprint/type/SubmittedJournalArticleen
eprint.statushttp://purl.org/eprint/status/PeerRevieweden
dspace.orderedauthorsMcGee, Sasha; Mirkovic, Jelena; Mardirossian, Vartan; Elackattu, Alphi; Yu, Chung-Chieh; Kabani, Sadru; Gallagher, George; Pistey, Robert; Galindo, Luis; Badizadegan, Kamran; Wang, Zimmern; Dasari, Ramachandra; Feld, Michael S.; Grillone, Gregoryen
mit.licensePUBLISHER_POLICYen
mit.metadata.statusComplete


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