Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace
Author(s)Qu, Kun; Garamszegi, Sara; Wu, Felix; Thorvaldsdottir, Helga; Liefeld, Ted; Ocana, Marco; Pochet, Nathalie; Robinson, James T; Demchak, Barry; Hull, Tim; Ben-Artzi, Gil; Blankenberg, Daniel; Barber, Galt P; Lee, Brian T; Kuhn, Robert M; Nekrutenko, Anton; Segal, Eran; Ideker, Trey; Reich, Michael; Chang, Howard Y; Mesirov, Jill P; Borges-Rivera, Diego Ramon; Regev, Aviv; ... Show more Show less
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Complex biomedical analyses require the use of multiple software tools in concert and remain challenging for much of the biomedical research community. We introduce GenomeSpace (http://www.genomespace.org), a cloud-based, cooperative community resource that currently supports the streamlined interaction of 20 bioinformatics tools and data resources. To facilitate integrative analysis by non-programmers, it offers a growing set of 'recipes', short workflows to guide investigators through high-utility analysis tasks.
DepartmentMassachusetts Institute of Technology. Department of Biology
Nature Publishing Group
Qu, Kun et al. “Integrative Genomic Analysis by Interoperation of Bioinformatics Tools in GenomeSpace.” Nature Methods 13.3 (2016): 245–247.
Author's final manuscript