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dc.contributor.authorGarwood, Indie C
dc.contributor.authorChakravarty, Sourish
dc.contributor.authorDonoghue, Jacob
dc.contributor.authorMahnke, Meredith
dc.contributor.authorKahali, Pegah
dc.contributor.authorChamadia, Shubham
dc.contributor.authorAkeju, Oluwaseun
dc.contributor.authorMiller, Earl K
dc.contributor.authorBrown, Emery Neal
dc.date.accessioned2021-10-27T20:28:48Z
dc.date.available2021-10-27T20:28:48Z
dc.date.issued2021-08
dc.identifier.urihttps://hdl.handle.net/1721.1/135689
dc.description.abstract<jats:p>Ketamine is an NMDA receptor antagonist commonly used to maintain general anesthesia. At anesthetic doses, ketamine causes high power gamma (25-50 Hz) oscillations alternating with slow-delta (0.1-4 Hz) oscillations. These dynamics are readily observed in local field potentials (LFPs) of non-human primates (NHPs) and electroencephalogram (EEG) recordings from human subjects. However, a detailed statistical analysis of these dynamics has not been reported. We characterize ketamine’s neural dynamics using a hidden Markov model (HMM). The HMM observations are sequences of spectral power in seven canonical frequency bands between 0 to 50 Hz, where power is averaged within each band and scaled between 0 and 1. We model the observations as realizations of multivariate beta probability distributions that depend on a discrete-valued latent state process whose state transitions obey Markov dynamics. Using an expectation-maximization algorithm, we fit this beta-HMM to LFP recordings from 2 NHPs, and separately, to EEG recordings from 9 human subjects who received anesthetic doses of ketamine. Our beta-HMM framework provides a useful tool for experimental data analysis. Together, the estimated beta-HMM parameters and optimal state trajectory revealed an alternating pattern of states characterized primarily by gamma and slow-delta activities. The mean duration of the gamma activity was 2.2s([1.7,2.8]s) and 1.2s([0.9,1.5]s) for the two NHPs, and 2.5s([1.7,3.6]s) for the human subjects. The mean duration of the slow-delta activity was 1.6s([1.2,2.0]s) and 1.0s([0.8,1.2]s) for the two NHPs, and 1.8s([1.3,2.4]s) for the human subjects. Our characterizations of the alternating gamma slow-delta activities revealed five sub-states that show regular sequential transitions. These quantitative insights can inform the development of rhythm-generating neuronal circuit models that give mechanistic insights into this phenomenon and how ketamine produces altered states of arousal.</jats:p>en_US
dc.language.isoen
dc.publisherPublic Library of Science (PLoS)en_US
dc.relation.isversionof10.1371/journal.pcbi.1009280en_US
dc.rightsCreative Commons Attribution 4.0 International licenseen_US
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/en_US
dc.sourcePLoSen_US
dc.titleA hidden Markov model reliably characterizes ketamine-induced spectral dynamics in macaque local field potentials and human electroencephalogramsen_US
dc.typeArticleen_US
dc.contributor.departmentHarvard University--MIT Division of Health Sciences and Technology
dc.contributor.departmentPicower Institute for Learning and Memory
dc.contributor.departmentMassachusetts Institute of Technology. Department of Brain and Cognitive Sciences
dc.relation.journalPLOS Computational Biologyen_US
dc.eprint.versionFinal published versionen_US
dc.type.urihttp://purl.org/eprint/type/JournalArticleen_US
eprint.statushttp://purl.org/eprint/status/PeerRevieweden_US
dc.date.updated2021-09-13T12:05:51Z
dspace.orderedauthorsGarwood, IC; Chakravarty, S; Donoghue, J; Mahnke, M; Kahali, P; Chamadia, S; Akeju, O; Miller, EK; Brown, ENen_US
dspace.date.submission2021-09-13T12:05:53Z
mit.journal.volume17en_US
mit.journal.issue8en_US
mit.licensePUBLISHER_CC
mit.metadata.statusAuthority Work and Publication Information Neededen_US


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