| dc.contributor.author | Rajapakse, Jagath | |
| dc.contributor.author | Pooja | |
| dc.contributor.author | Chen, Chunxi | |
| dc.contributor.author | Ho, Sy-Loi | |
| dc.date.accessioned | 2010-12-10T19:02:41Z | |
| dc.date.available | 2010-12-10T19:02:41Z | |
| dc.date.issued | 2009-07 | |
| dc.date.submitted | 2009-07 | |
| dc.identifier.issn | 0739-5175 | |
| dc.identifier.other | INSPEC Accession Number: 10781332 | |
| dc.identifier.uri | http://hdl.handle.net/1721.1/60264 | |
| dc.description.abstract | his article describes a workflow for identifying conserved patterns in noncoding regions of vertebrate genomes, with an intention of investigating possible functions of the conserved regions. The annotations of genomes are collected from the Ensembl database. The sequences are then arranged to use for sequence alignment with basic local alignment search tool Z (BLASTZ) [10], which finds gap- free alignments of at least q% identity and I b/s in length. All the conserved noncoding regions identified are stored in a relational database. An user-friendly Web interface provides easy access to conserved regions and related information and visualization capabilities. | en_US |
| dc.description.sponsorship | Singapore. Biomedical Research Council (grant no. 04/1/22/19/376) | en_US |
| dc.description.sponsorship | National Grid (Singapore) | en_US |
| dc.description.sponsorship | Sun Microsystems | en_US |
| dc.language.iso | en_US | |
| dc.publisher | Institute of Electrical and Electronics Engineers | en_US |
| dc.relation.isversionof | http://dx.doi.org/10.1109/MEMB.2009.932910 | en_US |
| dc.rights | Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. | en_US |
| dc.source | IEEE | en_US |
| dc.title | Comparative genomic workflow | en_US |
| dc.type | Article | en_US |
| dc.identifier.citation | Rajapakse, J. et al. “Comparative genomic workflow.” Engineering in Medicine and Biology Magazine, IEEE 28.4 (2009): 19-24. ©2009 IEEE. | en_US |
| dc.contributor.department | Massachusetts Institute of Technology. Department of Biological Engineering | en_US |
| dc.contributor.approver | Rajapakse, Jagath C | |
| dc.contributor.mitauthor | Rajapakse, Jagath | |
| dc.relation.journal | IEEE Engineering in Medicine and Biology Magazine | en_US |
| dc.eprint.version | Final published version | en_US |
| dc.identifier.pmid | PubMed ID: 19622420 | |
| dc.type.uri | http://purl.org/eprint/type/JournalArticle | en_US |
| eprint.status | http://purl.org/eprint/status/PeerReviewed | en_US |
| dspace.orderedauthors | Rajapakse, J.; Pooja, J.; Chunxi Chen, J.; Sy-Loi Ho, J. | en |
| mit.license | PUBLISHER_POLICY | en_US |
| mit.metadata.status | Complete | |
